BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C07LP1|AL429874
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1299 980 0.0
>3x_Contig1299
Length = 7525
Score = 980 bits (494), Expect = 0.0
Identities = 507/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 1 atcaatgaatgcaa-gaaaagtatcgatttacttgctacttatttagatgttattgcgtt 59
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2150 atcaatgaatgcaaagaaaagtatcgatttacttgctacttatttagatgtaattgcgtt 2209
Query: 60 attggcgcggatttgtttggcgcggttgctgcgggtgttgttgttgctgcgggtattgtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2210 attggcgcggatttgtttggcgcggttgctgcgggtgttgttgttgctgcgggtattgtt 2269
Query: 120 gttgctgctgctgctgttgttgttgttgaaactgtagagccatcattggatggccatatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2270 gttgctgctgctgctgttgttgttgttgaaactgtagagccatcattggatggccatatg 2329
Query: 180 ggaatgcatttggtgggataccttgagctggaattggaacattttgcccattgaagttca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2330 ggaatgcatttggtgggataccttgagctggaattggaacattttgcccattgaagttca 2389
Query: 240 ttggcatacctgacatcatataaggttgttgtgggtgggattgaggatggccttgtgaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2390 ttggcatacctgacatcatataaggttgttgtgggtgggattgaggatggccttgtgaag 2449
Query: 300 gaacttgaccttgcggaccaactttacttgctggctgttttggagcgctaggaggctgct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2450 gaacttgaccttgcggaccaactttacttgctggctgttttggagcgctaggaggctgct 2509
Query: 360 gttgtgggttacccaagtgttcggggaatcctttaccgttgctcattatacgtggctgtc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2510 gttgtgggttacccaagtgttcggggaatcctttaccgttgctcattatacgtggctgtc 2569
Query: 420 ccattccaggtggcggtggaggaggcatagcatagccaccttggaagtgctgtggaggca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2570 ccattccaggtggcggtggaggaggcatagcatagccaccttggaagtgctgtggaggaa 2629
Query: 480 ttcccataggaggggccatcatatgtggtg 509
||||||||||||||||||||||||||||||
Sbjct: 2630 ttcccataggaggggccatcatatgtggtg 2659
Score = 633 bits (319), Expect = 0.0
Identities = 341/345 (98%), Gaps = 3/345 (0%)
Strand = Plus / Plus
Query: 535 tgcctgcmttggagcacct-gattgagcaatgttttgtggtggtttaccatgttgctgct 593
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2685 tgcctgcattggagcacctcgattgagcaatgttttgtggtggtttaccatgttgctgct 2744
Query: 594 gctgagcaggatgagcatgctggctgtgttgttgatgaatttgttgaagtttgcgttgtt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 gctgagcaggatgagcatgctggctgtgttgttgatgaatttgttgaagtttgcgttgtt 2804
Query: 654 gaggttgctgctgctgctgttgatgtgggcgctgaatgtgttgctgttgttgctgttgtt 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 gaggttgctgctgctgctgttgatgtgggcgctgaatgtgttgctgttgttgctgttgtt 2864
Query: 714 gctgttgctgatgctgctgctgctgctgctgctgctgctgctgctgtgtgatgttaggta 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2865 gctgttgctgatgctgctgctgctgctgctgctgctgctgctgctgtgtgatgttaggta 2924
Query: 774 tctgagattgattttgggaaagg-ccgga-gggcagagactaagggctgttgcatcatat 831
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2925 tctgagattgattttgggaaaggcccggaggggcagagactaagggctgttgcatcatat 2984
Query: 832 tttcactgcctttagtcattaaactcttcaaaaacacgctgccat 876
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2985 tttcactgcctttagtcattaaactcttcaaaaacacgctgccat 3029
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,415
Number of Sequences: 1807
Number of extensions: 11415
Number of successful extensions: 1577
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)